ESCAPE

List of tables:

Interactions from Chip-seq/chip studies

Description:
The protein/DNA interactions table is extracted from ChIP-X studies. We collect interactions from supplementary Excel tables from ChIP-chip and ChIP-seq experiments. These interactions are also available in ChEA developed by the Ma'ayan laboratory . Altogether, the current version of ESCAPE includes 206,521 protein-DNA binding interactions in proximity to coding regions covering 48 ESC-relevant transcription factors and chromatin modifiers.

Number of entries: 206521

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sourceName	sourceID	targetName	targetID	pmid	chipType	cellType	modification_date
POU5F1	18999	ABCC1	17250	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ACBD4	67131	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ACCN4	241118	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ACCN5	58170	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ACD	497652	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ACLY	104112	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ACOT1	26897	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ACOT4	171282	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ACOT7	70025	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ACOT9	56360	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ACOX3	80911	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ACOXL	74121	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ACP2	11432	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ACP5	11433	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ACAD11	102632	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ABL2	11352	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ABCC12	244562	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ABCC4	239273	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ABCC5	27416	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ABCD4	19300	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ABCF1	224742	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ABCF2	27407	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ABCG1	11307	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ABCG2	26357	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ABHD11	68758	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ABHD8	64296	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ABI1	11308	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ABI3	66610	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ABL1	11350	18692474	ChIP-seq	MESC	2010-11-05
POU5F1	18999	ACP6	66659	18692474	ChIP-seq	MESC	2010-11-05

Operator	Field	Type	Equal/Not equal?	Value(s) (seperated by either , ; : tab space or return)
	sourceName	varchar(50)
	sourceID	int(11)
	targetName	varchar(50)
	targetID	int(11)
	pmid	int(11)
	chipType	varchar(50)
	cellType	varchar(50)
	modification_date	date

For more complicated searches either download the table and use your own SQL queries or contact us.